STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABHD1Abhydrolase domain containing 1. (422 aa)    
Predicted Functional Partners:
COL21A1
Collagen type XXI alpha 1 chain.
      
 0.614
pofut1
Protein O-fucosyltransferase 1.
      
 0.614
b4galt5
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5.
      
 0.614
akap7
Uncharacterized protein.
      
 0.614
LOC102216831
Zinc finger and BTB domain containing 24.
      
 0.614
epb41l2
Erythrocyte membrane protein band 4.1 like 2.
      
 0.614
zbtb46
Zinc finger and BTB domain containing 46.
      
 0.560
ak7
Adenylate kinase 7b.
   
  
 0.554
pcsk2
Proprotein convertase subtilisin/kexin type 2; Belongs to the peptidase S8 family.
      
 0.510
LOC102225387
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1.
      
 0.493
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.