STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102220547Uncharacterized protein. (619 aa)    
Predicted Functional Partners:
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.739
LOC102216861
Survival of motor neuron 1, telomeric.
    
 
 0.594
rpgrip1l
RPGRIP1 like.
    
 
 0.555
mbtps1
Membrane-bound transcription factor peptidase, site 1.
      
 0.539
LOC102228756
Actin related protein 1, centractin.
   
 
 0.536
actb
Uncharacterized protein.
   
 
 0.536
LOC102233599
Uncharacterized protein.
   
 
 0.536
ACTC1
Zgc:86709.
   
 
 0.536
acta2
Actin alpha 2, smooth muscle.
   
 
 0.536
ACTA1
Actin alpha 1, skeletal muscle.
   
 
 0.536
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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