STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nek4NIMA-related kinase 4. (871 aa)    
Predicted Functional Partners:
rpgrip1l
RPGRIP1 like.
   
 
 0.611
ttc21b
Tetratricopeptide repeat domain 21B.
    
 
 0.588
LOC102221602
NIMA-related kinase 6; Belongs to the protein kinase superfamily.
  
 
0.580
nek7
NIMA-related kinase 7; Belongs to the protein kinase superfamily.
  
 
0.578
cmc2
COX assembly mitochondrial protein.
      
 0.562
PLK1
Serine/threonine-protein kinase PLK.
   
0.437
plk2
Serine/threonine-protein kinase PLK.
   
0.437
plk3
Serine/threonine-protein kinase PLK.
   
0.437
srsf2
Serine and arginine rich splicing factor 2a.
    
 
 0.436
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 
 0.435
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.