STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bcl9BCL9 transcription coactivator. (1488 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.772
LOC102218559
RAN binding protein 2.
    
 0.554
LOC106699800
Uncharacterized protein.
  
 
  0.487
M3ZT51_XIPMA
TROVE domain-containing protein.
   
 0.484
LOC111609632
Uncharacterized protein.
  
 
  0.452
LOC102232951
Uncharacterized protein.
  
 
  0.451
rbbp5
Retinoblastoma binding protein 5.
    
 0.450
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.450
LOC102222495
Uncharacterized protein.
  
 
  0.443
LOC102220386
Lysine (K)-specific demethylase 6A, like.
    
 0.441
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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