STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mybV-myb avian myeloblastosis viral oncogene homolog. (596 aa)    
Predicted Functional Partners:
LOC102230576
CREB binding protein b.
   
 
 0.915
LOC102221134
CREB binding protein a.
   
 
 0.915
LOC102227508
CCAAT enhancer binding protein beta.
    
 0.898
LOC102230567
Runt-related transcription factor.
     
 0.773
LOC102235592
E1A binding protein p300 b.
   
 
 0.769
LOC102226082
E1A binding protein p300 a.
   
 
 0.769
lin52
Lin-52 DREAM MuvB core complex component.
    
 0.743
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.741
lin37
Lin-37 DREAM MuvB core complex component.
   
 0.734
fli1
Fli-1 proto-oncogene, ETS transcription factor a.
     
 0.721
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.