STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102221827Uncharacterized protein. (358 aa)    
Predicted Functional Partners:
fancl
FA complementation group L.
    
 0.916
fancf
FA complementation group F.
    
 0.915
fancg
FA complementation group G.
   
 0.914
fancc
FA complementation group C.
    
  0.911
hes4
Hairy-related 9.
  
  
 
0.903
hes1
Hairy-related 6.
  
  
 
0.902
fanci
FA complementation group I.
     
  0.900
fance
FA complementation group E.
    
  0.886
LOC102231709
Ubiquitin-conjugating enzyme E2T (putative).
    
  0.801
fancm
Uncharacterized protein.
     
  0.800
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.