STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111612340Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (442 aa)    
Predicted Functional Partners:
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
  
 
0.977
fadd
Uncharacterized protein.
   
 0.959
LOC102222390
Protein kinase domain-containing protein.
   
0.947
LOC102237850
Caspase 10, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
   
 0.828
LOC102236921
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.828
ENSXMAP00000032618
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.828
LOC102237443
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.818
tradd
Tnfrsf1a-associated via death domain.
   
 0.793
tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1.
   
 0.668
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.664
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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