Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSXMAP00000039162 | foxred2 | ENSXMAP00000039162 | ENSXMAP00000004525 | Thioredoxin domain containing 16. | FAD-dependent oxidoreductase domain containing 2. | 0.626 |
SUMF2 | foxred2 | ENSXMAP00000028168 | ENSXMAP00000004525 | Sulfatase modifying factor 2. | FAD-dependent oxidoreductase domain containing 2. | 0.487 |
SUMF2 | nenf | ENSXMAP00000028168 | ENSXMAP00000009495 | Sulfatase modifying factor 2. | Neudesin neurotrophic factor; Belongs to the cytochrome b5 family. | 0.440 |
atp5pb | foxred2 | ENSXMAP00000022297 | ENSXMAP00000004525 | ATP synthase peripheral stalk-membrane subunit b. | FAD-dependent oxidoreductase domain containing 2. | 0.490 |
dnajc10 | foxred2 | ENSXMAP00000024797 | ENSXMAP00000004525 | DnaJ (Hsp40) homolog, subfamily C, member 10. | FAD-dependent oxidoreductase domain containing 2. | 0.537 |
dnajc10 | sel1l | ENSXMAP00000024797 | ENSXMAP00000006953 | DnaJ (Hsp40) homolog, subfamily C, member 10. | SEL1L adaptor subunit of ERAD E3 ubiquitin ligase. | 0.634 |
erp27 | foxred2 | ENSXMAP00000024357 | ENSXMAP00000004525 | Uncharacterized protein. | FAD-dependent oxidoreductase domain containing 2. | 0.508 |
erp27 | nenf | ENSXMAP00000024357 | ENSXMAP00000009495 | Uncharacterized protein. | Neudesin neurotrophic factor; Belongs to the cytochrome b5 family. | 0.506 |
foxred2 | ENSXMAP00000039162 | ENSXMAP00000004525 | ENSXMAP00000039162 | FAD-dependent oxidoreductase domain containing 2. | Thioredoxin domain containing 16. | 0.626 |
foxred2 | SUMF2 | ENSXMAP00000004525 | ENSXMAP00000028168 | FAD-dependent oxidoreductase domain containing 2. | Sulfatase modifying factor 2. | 0.487 |
foxred2 | atp5pb | ENSXMAP00000004525 | ENSXMAP00000022297 | FAD-dependent oxidoreductase domain containing 2. | ATP synthase peripheral stalk-membrane subunit b. | 0.490 |
foxred2 | dnajc10 | ENSXMAP00000004525 | ENSXMAP00000024797 | FAD-dependent oxidoreductase domain containing 2. | DnaJ (Hsp40) homolog, subfamily C, member 10. | 0.537 |
foxred2 | erp27 | ENSXMAP00000004525 | ENSXMAP00000024357 | FAD-dependent oxidoreductase domain containing 2. | Uncharacterized protein. | 0.508 |
foxred2 | kmo | ENSXMAP00000004525 | ENSXMAP00000007728 | FAD-dependent oxidoreductase domain containing 2. | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid. | 0.507 |
foxred2 | ndor1 | ENSXMAP00000004525 | ENSXMAP00000003873 | FAD-dependent oxidoreductase domain containing 2. | NADPH-dependent diflavin oxidoreductase 1; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe/S cluster of CIAPIN1. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.572 |
foxred2 | nenf | ENSXMAP00000004525 | ENSXMAP00000009495 | FAD-dependent oxidoreductase domain containing 2. | Neudesin neurotrophic factor; Belongs to the cytochrome b5 family. | 0.568 |
foxred2 | sel1l | ENSXMAP00000004525 | ENSXMAP00000006953 | FAD-dependent oxidoreductase domain containing 2. | SEL1L adaptor subunit of ERAD E3 ubiquitin ligase. | 0.756 |
foxred2 | txn2 | ENSXMAP00000004525 | ENSXMAP00000023601 | FAD-dependent oxidoreductase domain containing 2. | Thioredoxin 2. | 0.632 |
kmo | foxred2 | ENSXMAP00000007728 | ENSXMAP00000004525 | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid. | FAD-dependent oxidoreductase domain containing 2. | 0.507 |
ndor1 | foxred2 | ENSXMAP00000003873 | ENSXMAP00000004525 | NADPH-dependent diflavin oxidoreductase 1; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe/S cluster of CIAPIN1. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | FAD-dependent oxidoreductase domain containing 2. | 0.572 |
page 1 of 2