STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Terb1Uncharacterized protein. (337 aa)    
Predicted Functional Partners:
terb2
Telomere repeat binding bouquet formation protein 2.
    
 
 0.940
majin
Membrane anchored junction protein.
      
 0.690
LOC102222899
Sad1 and UNC84 domain containing 1.
    
 
 0.669
gaa
Glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II); Belongs to the glycosyl hydrolase 31 family.
      
 0.625
LOC102223585
Si:ch73-12o23.1; Belongs to the glycosyl hydrolase 31 family.
      
 0.625
M4AKL8_XIPMA
Si:ch211-191j22.3.
      
 0.560
Basp1
Brain abundant, membrane attached signal protein 1.
      
 0.560
LOC102228467
SUN domain-containing protein.
    
 
 0.477
fam210b
Family with sequence similarity 210 member B.
      
 0.465
LOC102231624
SUN domain-containing protein.
    
 
 0.436
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.