STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102226393Zgc:66475. (506 aa)    
Predicted Functional Partners:
timeless
Timeless circadian clock.
    
 0.733
per1
Period circadian clock 1b.
   
 0.723
per3
Period circadian clock 3.
   
 0.714
PER2
Period circadian regulator 2.
   
 0.658
LOC102220757
Period circadian clock 2.
   
 0.658
LOC102227920
Cryptochrome circadian regulator 5.
      
 0.609
LOC102235655
Aryl hydrocarbon receptor nuclear translocator-like 2.
   
 0.567
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
 0.567
LOC102216993
Aryl hydrocarbon receptor nuclear translocator-like 1a.
   
 0.566
LOC102231883
Aryl hydrocarbon receptor nuclear translocator.
   
 0.534
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.