STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111608974Uncharacterized protein. (1460 aa)    
Predicted Functional Partners:
LOC111608327
Uncharacterized protein.
  
  0.540
LOC102221519
Matrin-type domain-containing protein.
  
 
  0.522
LOC111612259
Uncharacterized protein.
  
     0.502
LOC102227966
Uncharacterized protein.
  
    0.451
LOC102223319
Ig-like domain-containing protein.
   
  0.440
wdr18
WD repeat domain 18.
   
 0.437
crybg1
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
  
 
  0.432
s100pbp
Uncharacterized protein.
  
     0.432
LOC102236725
Ig-like domain-containing protein.
   
  0.421
ENSXMAP00000036304
Uncharacterized protein.
  
 
  0.418
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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