STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102232216Cholinergic receptor, nicotinic, alpha 4b. (631 aa)    
Predicted Functional Partners:
chrna1
Cholinergic receptor, nicotinic, alpha 1 (muscle).
  
0.830
LOC102228826
Cholinergic receptor, nicotinic, beta 4 (neuronal).
  
 
0.709
LOC102236331
Cholinergic receptor, nicotinic, epsilon.
  
 
0.709
chrng
Cholinergic receptor, nicotinic, gamma.
  
 
0.708
LOC102220371
Cholinergic receptor, nicotinic, beta 1 (muscle).
  
 
0.706
LOC102220633
Cholinergic receptor, nicotinic, beta 1 (muscle) like.
  
 
0.705
LOC102232696
Cholinergic receptor, nicotinic, beta 5a.
  
 
0.660
chrnb2
Cholinergic receptor, nicotinic, beta 2.
  
 
0.658
LOC102220186
Uncharacterized protein.
  
 
0.629
LOC102224427
Cholinergic receptor, nicotinic, alpha 5.
  
0.609
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.