STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abca3ATP-binding cassette, sub-family A (ABC1), member 3b. (1708 aa)    
Predicted Functional Partners:
MYADML2
Myeloid associated differentiation marker like 2.
   
  
 0.563
myadml2
Myeloid-associated differentiation marker-like 2.
   
  
 0.563
notum
Notum, palmitoleoyl-protein carboxylesterase a.
      
 0.560
fam13a
Family with sequence similarity 13 member A.
      
 0.547
sgsm1
Small G protein signaling modulator 1a.
      
 0.547
LOC102218364
Uncharacterized protein.
    
 0.544
LOC102232906
Uncharacterized protein.
      
 0.538
mapk8
Mitogen-activated protein kinase.
      
 0.538
LOC102220891
Leucine rich repeat containing 18b.
      
 0.538
ENSXMAP00000030671
ATP-binding cassette, sub-family A (ABC1), member 1B.
 
  
 
 0.510
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.