STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arfgef3SEC7 domain-containing protein. (2085 aa)    
Predicted Functional Partners:
PHB2
Prohibitin.
    
 
 0.678
LOC102219432
Prohibitin.
    
 
 0.678
ccdc167
Coiled-coil domain containing 167.
      
 0.601
drg2
Developmentally regulated GTP binding protein 2.
      
 0.560
orc5
Origin recognition complex, subunit 5.
      
 0.560
eapp
E2f-associated phosphoprotein.
      
 0.469
phb
Prohibitin.
    
 
 0.411
LOC102231110
Uncharacterized protein.
      
 0.410
chmp7
Charged multivesicular body protein 7.
      
 0.410
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.