STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcgf5Polycomb group ring finger 5a. (240 aa)    
Predicted Functional Partners:
auts2
Activator of transcription and developmental regulator AUTS2 a.
    
 0.954
rnf2
Ring finger protein 2.
    
 0.918
RING1
Ring finger protein 1.
    
 0.918
LOC102224174
Fibrosin.
    
 0.896
LOC102236902
YY1 associated factor 2.
    
 0.782
YAF2
YY1 associated factor 2.
    
 0.782
rybp
RING1 and YY1 binding protein b.
    
 0.782
LOC102232864
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
 0.778
LOC102217403
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
 0.778
scmh1
SAM domain-containing protein.
   
 0.746
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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