ssb protein (Xiphophorus maculatus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

ssb

Small RNA binding exonuclease protection factor La. (403 aa)

Predicted Functional Partners:

ro60

0.787

zc3h15

0.760

cct8

0.699

LOC102230228

0.678

snrpd2

0.660

c1qbp

0.653

snrpd3

0.638

ilf2

0.607

nop58

0.603

snrpe

0.596

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102230228	ilf2	ENSXMAP00000009357	ENSXMAP00000003310	RRM domain-containing protein.	Interleukin enhancer binding factor 2.	0.900
LOC102230228	snrpd2	ENSXMAP00000009357	ENSXMAP00000001004	RRM domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.768
LOC102230228	snrpd3	ENSXMAP00000009357	ENSXMAP00000001128	RRM domain-containing protein.	Small nuclear ribonucleoprotein Sm D3.	0.677
LOC102230228	snrpe	ENSXMAP00000009357	ENSXMAP00000008868	RRM domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.735
LOC102230228	ssb	ENSXMAP00000009357	ENSXMAP00000004905	RRM domain-containing protein.	Small RNA binding exonuclease protection factor La.	0.678
c1qbp	ssb	ENSXMAP00000005690	ENSXMAP00000004905	Complement component 1, q subcomponent binding protein.	Small RNA binding exonuclease protection factor La.	0.653
cct8	nop58	ENSXMAP00000031533	ENSXMAP00000013707	Chaperonin containing TCP1, subunit 8 (theta).	NOP58 ribonucleoprotein homolog (yeast).	0.587
cct8	ssb	ENSXMAP00000031533	ENSXMAP00000004905	Chaperonin containing TCP1, subunit 8 (theta).	Small RNA binding exonuclease protection factor La.	0.699
ilf2	LOC102230228	ENSXMAP00000003310	ENSXMAP00000009357	Interleukin enhancer binding factor 2.	RRM domain-containing protein.	0.900
ilf2	snrpd2	ENSXMAP00000003310	ENSXMAP00000001004	Interleukin enhancer binding factor 2.	Small nuclear ribonucleoprotein Sm D2.	0.746
ilf2	snrpd3	ENSXMAP00000003310	ENSXMAP00000001128	Interleukin enhancer binding factor 2.	Small nuclear ribonucleoprotein Sm D3.	0.562
ilf2	snrpe	ENSXMAP00000003310	ENSXMAP00000008868	Interleukin enhancer binding factor 2.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.615
ilf2	ssb	ENSXMAP00000003310	ENSXMAP00000004905	Interleukin enhancer binding factor 2.	Small RNA binding exonuclease protection factor La.	0.607
nop58	cct8	ENSXMAP00000013707	ENSXMAP00000031533	NOP58 ribonucleoprotein homolog (yeast).	Chaperonin containing TCP1, subunit 8 (theta).	0.587
nop58	ssb	ENSXMAP00000013707	ENSXMAP00000004905	NOP58 ribonucleoprotein homolog (yeast).	Small RNA binding exonuclease protection factor La.	0.603
ro60	ssb	ENSXMAP00000004847	ENSXMAP00000004905	Ro60, Y RNA binding protein.	Small RNA binding exonuclease protection factor La.	0.787
snrpd2	LOC102230228	ENSXMAP00000001004	ENSXMAP00000009357	Small nuclear ribonucleoprotein Sm D2.	RRM domain-containing protein.	0.768
snrpd2	ilf2	ENSXMAP00000001004	ENSXMAP00000003310	Small nuclear ribonucleoprotein Sm D2.	Interleukin enhancer binding factor 2.	0.746
snrpd2	snrpd3	ENSXMAP00000001004	ENSXMAP00000001128	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D3.	0.999
snrpd2	snrpe	ENSXMAP00000001004	ENSXMAP00000008868	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999