STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102235904A-Raf proto-oncogene, serine/threonine kinase. (594 aa)    
Predicted Functional Partners:
map2k1
Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.
   
0.979
map2k2
Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily.
   
0.979
LOC102232995
Zgc:55558.
   
 0.976
hras
HRas proto-oncogene, GTPase a.
   
 0.976
mras
Muscle RAS oncogene homolog.
   
 0.964
LOC102226857
RAS related.
   
 0.962
mos
V-mos Moloney murine sarcoma viral oncogene homolog; Belongs to the protein kinase superfamily.
     
 
0.908
braf
B-Raf proto-oncogene, serine/threonine kinase.
  
  
0.908
map2k5
Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily.
   
0.807
LOC102235995
RAP1A, member of RAS oncogene family b.
   
 0.775
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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