STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102224240Ig-like domain-containing protein; Belongs to the MHC class I family. (389 aa)    
Predicted Functional Partners:
cd8a
Ig-like domain-containing protein.
    
 0.896
LOC102228909
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
 0.857
LOC102228633
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
 0.857
LOC102220809
Calreticulin.
    
 0.835
LOC102217437
Calreticulin.
    
 0.806
pdia3
Protein disulfide-isomerase.
    
  0.799
LOC102231445
Ig-like domain-containing protein.
     
 0.655
rpa2
Replication protein A2.
   
 0.608
LOC102230232
RPA_C domain-containing protein.
   
 0.608
ENSXMAP00000037365
Uncharacterized protein.
    
  0.590
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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