STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgef39Rho guanine nucleotide exchange factor (GEF) 39. (414 aa)    
Predicted Functional Partners:
rnls
Renalase, FAD-dependent amine oxidase.
      
 0.539
melk
Non-specific serine/threonine protein kinase.
   
  
 0.453
arhgef37
Rho guanine nucleotide exchange factor (GEF) 37.
    
0.438
ARHGEF4
Rho guanine nucleotide exchange factor 4.
    
0.436
arhgef9
Cdc42 guanine nucleotide exchange factor (GEF) 9b.
    
0.436
LOC102231756
Spermatogenesis associated 13.
    
 0.436
cnep1r1
CTD nuclear envelope phosphatase 1 regulatory subunit 1.
     
 0.416
LOC102237452
Rho GTPase activating protein 36.
      
 0.412
haus6
HAUS augmin-like complex, subunit 6.
      
 0.410
LOC102222452
Syndecan binding protein (syntenin) 2.
      
 0.403
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.