STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIC1RIC1 homolog, RAB6A GEF complex partner 1. (1441 aa)    
Predicted Functional Partners:
rgp1
GP1 homolog, RAB6A GEF complex partner 1.
    
 0.991
LOC102236194
RAB33B, member RAS oncogene family a.
    
 0.867
cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.865
rab6a
RAB6A, member RAS oncogene family.
    
 0.847
LOC102217653
RAB6B, member RAS oncogene family.
    
 0.847
LOC102223209
RAB6B, member RAS oncogene family a.
    
 0.847
RAB41
RAB41, member RAS oncogene family.
    
 0.847
arfrp1
ADP-ribosylation factor related protein 1.
    
 0.845
LOC102234827
RAB33A, member RAS oncogene family.
    
 0.804
dicer1
Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily.
   
 0.777
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.