STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102226336Dehydrogenase/reductase (SDR family) member 7Cb. (313 aa)    
Predicted Functional Partners:
akip1
A kinase (PRKA) interacting protein 1.
      
 0.532
oxsm
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.506
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 
 0.500
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 
 0.500
mcrip1
Uncharacterized protein.
    
 
 0.498
DHRS9
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.497
saysd1
Si:ch211-59d15.9.
      
 0.487
fdx2
Ferredoxin 2.
   
 0.474
Fdx1
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.474
mcat
Malonyl CoA:ACP acyltransferase (mitochondrial).
  
 
 0.452
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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