STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102231902Uncharacterized protein. (610 aa)    
Predicted Functional Partners:
etfa
Electron transfer flavoprotein subunit alpha.
    
 0.682
RUBCNL
Rubicon like autophagy enhancer.
   
    0.679
cwc25
CWC25 spliceosome associated protein homolog.
   
    0.679
c13h1orf109
C19h1orf109 homolog (H. sapiens).
   
    0.679
LOC102232383
Thioesterase superfamily member 4.
     
 0.608
cryl1
Crystallin, lambda 1.
  
 
 0.608
hadh
Hydroxyacyl-CoA dehydrogenase.
  
 
 0.608
etfb
Electron transfer flavoprotein subunit beta.
    
  0.604
ftsj1
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
    0.589
LIX1L
Limb and CNS expressed 1 like.
   
    0.588
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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