STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cxxc1CXXC finger protein 1b. (571 aa)    
Predicted Functional Partners:
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
   
 0.959
rbbp5
Retinoblastoma binding protein 5.
    
 0.956
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.903
wdr82
WD repeat domain 82.
   
 0.865
LOC102223222-2
WD_REPEATS_REGION domain-containing protein.
   
 0.865
LOC102234339
SET domain containing 1A, histone lysine methyltransferase.
   
 0.837
setd1b
SET domain containing 1B, histone lysine methyltransferase a.
   
 0.837
ENSXMAP00000021353
Uncharacterized protein.
   
 
 0.756
wdr5
WD repeat domain 5.
   
 
 0.714
wsb2
WD repeat and SOCS box containing 2.
   
 
 0.648
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.