STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snap47Synaptosome associated protein 47. (422 aa)    
Predicted Functional Partners:
vamp7
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
    
 0.700
tmem244
Transmembrane protein 244.
   
  
 0.698
stx18
Syntaxin 18.
    
 
 0.690
ENSXMAP00000041076
Uncharacterized protein.
    
 0.680
ENSXMAP00000020527
C2 domain-containing protein.
   
 
 0.666
ENSXMAP00000023381
PDZ domain-containing protein.
   
 
 0.666
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.666
stx7
Syntaxin 7-like; Belongs to the syntaxin family.
   
 0.652
stx12
Syntaxin 12; Belongs to the syntaxin family.
   
 0.652
M3ZDQ5_XIPMA
Vesicle-associated membrane protein 2.
   
 0.648
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.