STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcg4ATP-binding cassette, sub-family G (WHITE), member 4a. (639 aa)    
Predicted Functional Partners:
LOC102235069
ABC transporter domain-containing protein.
  
  
 
0.901
abcg5
ATP-binding cassette, sub-family G (WHITE), member 5.
   
0.814
amn
Amnion associated transmembrane protein.
      
 0.557
cubn
Cubilin (intrinsic factor-cobalamin receptor).
      
 0.534
LOC106699636
Uncharacterized protein.
   
 0.519
LOC102232016
Uncharacterized protein.
   
 0.519
atp5f1c
ATP synthase subunit gamma.
   
   0.496
LOC102237750
Transcobalamin II.
   
  
 0.488
atp5f1d
ATP synthase F1 subunit delta.
   
   0.476
cdca8
Cell division cycle associated 8.
   
 
 0.458
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.