STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hinfpHistone H4 transcription factor. (465 aa)    
Predicted Functional Partners:
gsc
Goosecoid.
    
   0.851
taf8
TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
    0.489
lrrc57
Leucine rich repeat containing 57.
   
    0.487
ENSXMAP00000027862
LisH domain-containing protein.
    
 
 0.482
znf318
Uncharacterized protein.
      
 0.468
foxi2
Forkhead box i1.
      
 0.465
hmx3
H6 family homeobox 3.
    
   0.461
LOC102229085
Homeobox domain-containing protein.
    
   0.461
LOC102229893
H6 family homeobox 3a.
    
   0.461
LOC102219277
H6 family homeobox 4.
    
   0.461
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.