STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102235995RAP1A, member of RAS oncogene family b. (185 aa)    
Predicted Functional Partners:
braf
B-Raf proto-oncogene, serine/threonine kinase.
   
 0.976
LOC102235637
Rap guanine nucleotide exchange factor (GEF) 1b.
    
 0.963
Rapgef1
Ras-GEF domain-containing protein.
    
 0.963
rapgef6
Rap guanine nucleotide exchange factor (GEF) 6.
    
 0.944
LOC102235553
Uncharacterized protein.
    
 0.935
mapk10
Mitogen-activated protein kinase.
   
 0.928
LOC102237237
Mitogen-activated protein kinase.
   
 0.928
mapk8
Mitogen-activated protein kinase.
   
 0.928
LOC102234094
Mitogen-activated protein kinase.
   
 0.928
prkaca
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.
   
 0.924
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.