STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap58Cilia and flagella associated protein 58. (862 aa)    
Predicted Functional Partners:
M3ZXF4_XIPMA
Si:zfos-223e1.2.
   
  
 0.637
cfap70
Uncharacterized protein.
      
 0.596
Iqca1
Zgc:153738.
   
  
 0.563
TTC29
Tetratricopeptide repeat domain 29.
      
 0.560
maats1
MYCBP-associated, testis expressed 1.
   
 0.508
armc2
Armadillo repeat containing 2.
      
 0.471
birc6
Baculoviral IAP repeat containing 6.
   
 
  0.443
tbk1
TANK-binding kinase 1.
    
 0.420
LOC102228722
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.420
LOC102226088
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.420
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.