STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap53Uncharacterized protein. (512 aa)    
Predicted Functional Partners:
LOC102226320
Cilia and flagella associated protein 52.
   
 0.720
cfap52
Cilia and flagella associated protein 52.
   
 0.720
LOC102232903
Uncharacterized protein.
   
 0.697
tekt2
Tektin 2 (testicular).
   
 
 0.690
mns1
Meiosis-specific nuclear structural 1.
   
 0.668
tekt3
Tektin 3.
   
 
 0.667
efhc2
EF-hand domain (C-terminal) containing 2.
   
 
 0.635
LOC102226728
Coiled-coil domain containing 114.
   
 
 0.635
c12h9orf116
Uncharacterized protein.
    
 
 0.625
ccdc151
Uncharacterized protein.
   
 0.623
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.