STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102224717Uncharacterized protein. (474 aa)    
Predicted Functional Partners:
LOC102219125
BPI fold containing family C, like.
  
 
 
0.923
LOC102218234
Microseminoprotein, beta-like.
   
 
 0.663
LOC106699636
Uncharacterized protein.
   
 0.585
LOC102232016
Uncharacterized protein.
   
 0.585
LOC102235829
TIR domain-containing protein.
   
 
 0.525
ENSXMAP00000033823
TIR domain-containing protein.
   
 
 0.525
sys1
Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family.
     
 0.494
c9
Complement component 9.
      
 0.493
LOC102222672
Si:ch211-153j24.3.
      
 0.493
LOC102223022
V-fos FBJ murine osteosarcoma viral oncogene homolog Aa.
      
 0.487
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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