STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102230362Myosin, heavy chain 9a, non-muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1950 aa)    
Predicted Functional Partners:
LOC102224566
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.799
LOC102236739
Uncharacterized protein.
   
 0.794
LOC102221965
Myosin, light chain 6, alkali, smooth muscle and non-muscle.
   
 0.794
LOC102224997
Myosin, light chain 9a, regulatory.
   
 0.701
LOC102228027
Uncharacterized protein.
   
 0.685
LOC102237517
Uncharacterized protein.
   
 0.685
LOC102217899
Myosin, light chain 13.
   
 0.593
myl7
Myosin, light chain 7, regulatory.
   
 0.592
LOC102228744
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
 0.579
LOC102234161
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 0.579
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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