STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STRNStriatin. (779 aa)    
Predicted Functional Partners:
strip1
Striatin interacting protein 1.
    
 
 0.753
LOC102227670
Striatin interacting protein 2.
    
 
 0.747
ppp2r1b
Protein phosphatase 2, regulatory subunit A, beta b.
   
 
 0.720
LOC102225458
MOB family member 4, phocein.
   
 
 0.714
fgfr1op2
FGFR1 oncogene partner 2.
    
 
 0.705
pdcd10
Programmed cell death 10b.
    
 
 0.664
LOC102220295
CTTNBP2 N-terminal like b.
   
 
 0.663
cttnbp2nl
CTTNBP2 N-terminal like a.
   
 
 0.663
ccm2
CCM2 scaffold protein.
     
 0.661
ush1c
Usher syndrome 1C.
      
 0.652
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.