STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc22a15Solute carrier family 22 member 15. (500 aa)    
Predicted Functional Partners:
SLC35F5
Solute carrier family 35 member F5.
    
 
 0.561
slc25a34
Solute carrier family 25 member 34; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.522
ints9
Integrator complex subunit 9.
    
 0.513
ints11
Integrator complex subunit 11.
   
 0.513
ints1
Integrator complex subunit 1.
    
 0.510
LOC102225979
C2H2-type domain-containing protein.
      
 0.487
ints4
Integrator complex subunit 4.
    
 0.481
ints3
Integrator complex subunit 3.
    
 0.478
ints7
Integrator complex subunit 7.
    
 0.476
ints13
Integrator complex subunit 13.
    
 0.473
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.