STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M3ZWZ6_XIPMAMyosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (592 aa)    
Predicted Functional Partners:
Myo5b
Dilute domain-containing protein.
 
      0.812
ENSXMAP00000030800
Dilute domain-containing protein.
 
      0.807
rab11a
RAB11a, member RAS oncogene family.
   
 0.714
LOC102226911
RAB11a, member RAS oncogene family, like.
   
 0.679
LOC102218510
RAB11B, member RAS oncogene family, b.
   
 0.679
LOC102236307
Uncharacterized protein.
   
 0.679
LOC102219022
RAB11B, member RAS oncogene family, a.
   
 0.679
exoc4
Exocyst complex component 4.
    
 0.619
calm3
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.587
LOC102227246
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.587
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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