STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102231658Endo/exonuclease/phosphatase domain-containing protein. (251 aa)    
Predicted Functional Partners:
tbk1
TANK-binding kinase 1.
   
 0.791
LOC102228722
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.791
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.657
LOC102227944
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.629
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.629
LOC102217350
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.629
LOC102233408
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.629
LOC102228854
Interferon regulatory factor 3.
    
 0.576
LOC102229095
Ras-related GTP binding A.
   
 0.493
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.463
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
Server load: high (90%) [HD]