STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FMN1Formin 1. (1299 aa)    
Predicted Functional Partners:
arhgap11a
Rho GTPase activating protein 11A.
      
 0.654
suox
Sulfite oxidase.
      
 0.640
LOC102232684
Profilin; Belongs to the profilin family.
    
 0.564
LOC102228356
Profilin; Belongs to the profilin family.
    
 0.564
LOC102226806
Profilin; Belongs to the profilin family.
    
 0.564
scg5
Secretogranin V.
      
 0.560
fyttd1
Uncharacterized protein.
    
 0.544
washc1
WAS protein family homolog 1.
    
 0.494
LOC102222381
Myosin IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.491
myo9a
Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.491
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.