STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M3ZXF4_XIPMASi:zfos-223e1.2. (774 aa)    
Predicted Functional Partners:
cfap58
Cilia and flagella associated protein 58.
   
  
 0.637
maats1
MYCBP-associated, testis expressed 1.
  
 
 0.597
naa20
N(alpha)-acetyltransferase 20, NatB catalytic subunit.
    
 
 0.562
cfap70
Uncharacterized protein.
   
 
 0.552
cfap44
WD_REPEATS_REGION domain-containing protein.
  
 
 
 0.496
crnkl1
Crooked neck pre-mRNA splicing factor 1.
      
 0.491
ccdc127
Coiled-coil domain containing 127a.
      
 0.487
cfap53
Uncharacterized protein.
      
 0.465
tmod3
Tropomodulin 2.
    
 
 0.439
wdr66
WD repeat domain 66.
    
 
 0.423
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.