STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prdm11PR domain containing 11. (999 aa)    
Predicted Functional Partners:
spo11
SPO11 initiator of meiotic double stranded breaks.
     
 0.629
prdm16
Si:ch211-263k4.2.
    
 
 0.620
prdm13
PR domain containing 13.
    
 
 0.459
arl15
ADP-ribosylation factor-like 15a.
     
 0.436
prdm2
PR domain containing 2, with ZNF domain b.
      
 0.421
LOC102218386
PR domain containing 2, with ZNF domain a.
      
 0.416
rwdd2b
RWD domain containing 2B.
      
 0.412
prdm12
PR domain zinc finger protein 12; Involved in the positive regulation of histone H3-K9 dimethylation; Belongs to the class V-like SAM-binding methyltransferase superfamily.
      
 0.407
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.