STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111611425Si:dkey-177p2.18. (412 aa)    
Predicted Functional Partners:
lypla1
Lysophospholipase 1.
     
 0.910
LOC102230865
Lecithin-cholesterol acyltransferase.
     
 0.908
LOC102219714
Phospholipase A2, group XV.
     
 0.905
pnpla6
Patatin-like phospholipase domain containing 6.
   
 
 0.905
LOC102221396
LRAT domain-containing protein.
     
 0.904
LOC102225455
Uncharacterized protein.
  
  
 
0.904
plb1
Uncharacterized protein.
  
  
 
0.904
enpp6
Ectonucleotide pyrophosphatase/phosphodiesterase 6.
     
 0.902
LOC102230685
LRAT domain-containing protein.
     
 0.902
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
     
 0.901
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.