STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smc3Structural maintenance of chromosomes protein. (1217 aa)    
Predicted Functional Partners:
rad21
RAD21 cohesin complex component a.
   
 0.996
LOC102220833
Structural maintenance of chromosomes protein.
   
0.996
smc1a
Structural maintenance of chromosomes protein.
   
0.996
LOC102238282
RAD21 cohesin complex component b.
   
 0.993
M4AUE5_XIPMA
Rad21_Rec8_N domain-containing protein.
   
 0.993
espl1
Extra spindle pole bodies like 1, separase.
   
 0.987
pds5b
PDS5 cohesin associated factor B.
   
 0.981
pds5a
PDS5 cohesin associated factor A.
   
 0.981
LOC102235820
Si:ch211-269e2.1.
   
 0.979
LOC102231604
Stromal antigen 2a.
   
 0.979
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.