STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M3ZXZ2_XIPMABmi1 polycomb ring finger oncogene 1a. (345 aa)    
Predicted Functional Partners:
rnf2
Ring finger protein 2.
   
 0.950
RING1
Ring finger protein 1.
   
 0.950
LOC102227807
Chromobox homolog 8a (Pc class homolog, Drosophila).
    
 0.857
cbx8
Chromobox homolog 8b.
    
 0.857
LOC102232224
Chromobox homolog 4 (Pc class homolog, Drosophila).
    
 0.842
cbx4
Chromobox 4.
    
 0.842
cbx6
Chromobox homolog 6a.
    
 0.828
LOC102219219
Scm polycomb group protein like 2.
   
 0.784
SCML2
Scm polycomb group protein like 2.
   
 0.784
scmh1
SAM domain-containing protein.
   
 0.784
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.