STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdm6aLysine (K)-specific demethylase 6A. (1443 aa)    
Predicted Functional Partners:
birc6
Baculoviral IAP repeat containing 6.
   
 0.987
rbbp5
Retinoblastoma binding protein 5.
    
 0.962
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.960
ATP6
ATP synthase subunit a.
  
 0.946
atp5f1d
ATP synthase F1 subunit delta.
  
 0.946
atp5f1c
ATP synthase subunit gamma.
  
 0.932
eed
Embryonic ectoderm development.
   
 0.932
atp5po
ATP synthase peripheral stalk subunit OSCP.
  
 0.929
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.902
LOC102222902
Histone domain-containing protein.
   
 0.901
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.