STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102236051Low density lipoprotein receptor b. (857 aa)    
Predicted Functional Partners:
ldlrap1
Low density lipoprotein receptor adaptor protein 1b.
    
 0.970
dab2
DAB adaptor protein 2.
    
 0.950
LOC102237823
Low density lipoprotein receptor adaptor protein 1a.
    
  0.944
LOC102221773
Si:dkey-19b23.8.
    
  0.925
LOC102225928
Si:dkey-71h2.2.
    
  0.925
ldlr
Low density lipoprotein receptor a.
  
  
 
0.902
RELN
Reelin.
    
 0.824
pcsk9
Proprotein convertase subtilisin/kexin type 9.
    
 0.803
LOC102229272
DAB adaptor protein 1b.
    
 0.687
dab1
DAB adaptor protein 1a.
    
 0.687
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.