STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL6LHFPL tetraspan subfamily member 6. (204 aa)    
Predicted Functional Partners:
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
      
 0.721
LOC102233370
Uncharacterized protein.
   
  
 0.583
LOC102234416
ADP-ribosylation factor interacting protein 2a.
   
  
 0.571
LOC102229168
ADP-ribosylation factor interacting protein 2b.
   
  
 0.571
LOC102233992
Tripartite motif containing 3a.
   
  
 0.560
mrps31
Mitochondrial ribosomal protein S31.
      
 0.560
LOC102216937
5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1.
      
 0.560
LOC102228733
Tripartite motif containing 3b.
   
  
 0.560
LOC102227496
Dachsous cadherin-related 1a.
   
 0.559
LOC102226727
Transient receptor potential cation channel subfamily C member 4; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.547
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.