STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc22a16Solute carrier family 22 member 16. (577 aa)    
Predicted Functional Partners:
smox
Spermine oxidase.
      
 0.559
slc22a18
Solute carrier family 22 member 18.
   
  
 0.550
ints9
Integrator complex subunit 9.
    
 0.513
ints1
Integrator complex subunit 1.
    
 0.510
ints11
Integrator complex subunit 11.
    
 0.498
slc25a16
Solute carrier family 25 member 16; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.495
ints4
Integrator complex subunit 4.
    
 0.481
ints3
Integrator complex subunit 3.
    
 0.478
ints7
Integrator complex subunit 7.
    
 0.476
ints13
Integrator complex subunit 13.
    
 0.473
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.