STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M3ZZN8_XIPMAArginine/serine-rich protein 1. (235 aa)    
Predicted Functional Partners:
LOC102223456
Rh blood group, D antigen; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
      
 0.582
tmem50a
Transmembrane protein 50A.
      
 0.582
syf2
SYF2 pre-mRNA-splicing factor.
      
 0.580
TMEM50B
Transmembrane protein 50B.
      
 0.418
LOC102236871
Macoilin 1a.
      
 0.414
maco1
Macoilin 1b.
      
 0.414
mettl4
Methyltransferase like 4; Belongs to the MT-A70-like family.
      
 0.410
mtpap
Mitochondrial poly(A) polymerase.
      
 0.410
supt7l
SPT7 like, STAGA complex gamma subunit.
      
 0.410
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.