STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102233342Clusterin; Belongs to the clusterin family. (459 aa)    
Predicted Functional Partners:
gucd1
Guanylyl cyclase domain containing 1.
      
 0.731
dctn4
Dynactin 4.
      
 0.731
LOC102221529
Uncharacterized protein.
      
 0.616
LOC102224057
V-fos FBJ murine osteosarcoma viral oncogene homolog Ab.
      
 0.592
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 
 0.531
LOC102223022
V-fos FBJ murine osteosarcoma viral oncogene homolog Aa.
      
 0.516
LOC102225876
Complement component c3b, tandem duplicate 2.
   
 
 0.463
M4A517_XIPMA
Interphotoreceptor retinoid-binding protein like.
   
  
 0.443
rbp3
Retinol binding protein 3.
   
  
 0.443
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.