STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asb14Ankyrin repeat and SOCS box containing 14a. (592 aa)    
Predicted Functional Partners:
LOC102225196
Fleer.
    
 0.548
ift81
Intraflagellar transport 81 homolog.
    
 0.496
asb4
Ankyrin repeat and SOCS box containing 4.
  
 
0.494
ANKRD34A
Ankyrin repeat domain 34A.
  
     0.487
commd1
Copper metabolism (Murr1) domain containing 1.
    
 0.485
LOC102217801
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.
  
  
  0.482
ENSXMAP00000041253
ANK_REP_REGION domain-containing protein.
  
 
  0.475
ankrd54
Ankyrin repeat domain 54.
  
     0.463
commd8
COMM domain containing 8.
   
  0.451
ift88
Intraflagellar transport 88 homolog.
   
 0.444
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.