STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102221911Akirin 2. (207 aa)    
Predicted Functional Partners:
psma5
Proteasome subunit alpha type.
    
   0.807
psma1
Proteasome subunit alpha type.
    
   0.785
psma2
Proteasome subunit alpha type.
    
   0.778
psma4
Proteasome subunit beta; Belongs to the peptidase T1B family.
    
   0.750
ARHGEF2
Rho/rac guanine nucleotide exchange factor (GEF) 2.
    
 
 0.709
psmb2
Proteasome subunit beta.
    
   0.694
LOC102235662
Tyrosine-protein kinase.
    
 
 0.691
rc3h1
Ring finger and CCCH-type domains 1b.
      
 0.690
znf148
Zinc finger protein 148.
      
 0.690
dhx58
DEXH (Asp-Glu-X-His) box polypeptide 58.
      
 0.686
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.