STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102225368Neuregulin 3b. (785 aa)    
Predicted Functional Partners:
LOC102231767
Receptor protein-tyrosine kinase.
    
 0.925
erbb4
Receptor protein-tyrosine kinase.
    
 0.925
ENSXMAP00000029947
EGF-like domain-containing protein.
     
 
0.903
LOC111608121
Si:dkey-33i11.1.
  
  
  0.453
LOC102235269
ADP-ribosylation factor 2b.
  
 
 
 0.441
PLK1
Serine/threonine-protein kinase PLK.
   
 0.403
plk2
Serine/threonine-protein kinase PLK.
   
 0.403
plk4
Polo-like kinase 4 (Drosophila).
   
 0.403
plk3
Serine/threonine-protein kinase PLK.
   
 0.403
ckap5
Cytoskeleton associated protein 5.
    
 
 0.400
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.